Plant GARDEN How To ▶︎

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Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900147.1_cds_XP_016450171.1_44646

CDS Infomation

[gene=LOC107775018] [db_xref=GeneID:107775018] [protein=squamous cell carcinoma antigen recognized by T-cells 3-like isoform X5] [protein_id=XP_016450171.1] [location=complement(join(41672..41949,42616..42772,43811..43903,44003..44371,44837..44911,45630..45753,45869..46011,47080..47193,47936..47980,48491..48616,48698..48832,49303..49578,50904..51119,52114..52171,53639..53712))] [gbkey=CDS]

Sequence

ATGAATACTATTTTTCCTTTGAGTTCTGAGATGTGGCAGGAGTGGACTAAAGACGAGACA
TCTCTTTCTTCGGGACCCGAGGCTCTCCCTGCAATTGAGAAGCTATTTGAGCATGGGGTG
TCTGACTATCTTTCTGTTGCTTTGTGGTGTGACTACTTAAGTTTTGTTCAAGAGCATGAC
CAATCAGTCCGTACACGTTCCGTCGGTGGAATTTCAAAGGCAAGAAATCTCTTTGAGCGT
GCCCTTGTAGCTGCCGGTTTGCATGTTACTGAAGGCAGCAGGATATGGGAATTATACAGG
GAATTCGAACAAGATGTTTTCCTCACAATTGATGAAACTGATGCGGACTTGAGAGAGAAG
CAGGTCCAGCGTATTAGGAATTTATTCCATCGCCAGTTGTCTGTCCCTCTTGCTGATCTA
AGTTCAACTCTTCACACATACAAGGCTTGGGAAGCAAAACAGGGAGCCGATCTTGATGTA
GACTCCAGTAACTTGGATGGGCTTTCGCCACATGTTGCCTCTTCATATCAGAAGGCCCTC
GACATGATGAATGCCAGGACTCATCTTGAGAATCAAATATCTTGTAAAGTTGCACCTGAA
TCGGAAAGGCTTCAAAACTTTATGGCTTACTTAAAATTTGAGCAATCATTGGGGGATCCA
TCGAGGATACAGATCTTATATGAGCGTGCCATAACTGAATTTCCTATATCTAGTGAACTC
TGGCTTGATTATACTCACTACATGGATAAAACCTTGAAGACCTCCAGTCTTGTTCGGGAC
ATTTACAAAAGGGCGACAAGGAACTGTCCCTGGGTTGGAGACCTGTGGGTGCGATACTTG
CTGTCTCTTGAACGCAGTCGTGCTTCTGAGGAAGAGCTATCTGCTGTTTTCGAGAAGGCC
CTACAGTGCACTTTCTCAAGCTTTGAAGAGTATCTTGATGTATTTCTCACAAGAGTTGAT
GGCTTAAGGCGGAGGTTGTCTTCGTTGGAATCTGGGCCTGAAAGCAGCGACTTAGATTAT
ATAATTATACGGGAAACTTTTCAGCGTGCATCAGATTATTTGTCTCCACATCTGAAGAAT
ACAGAAAGTTTATTGCGGATGTACAGATATTGGACCCGCTTAGAATCAACTCTGGGGAAA
GATTCAGCTGCAGCTCGTGGTGTCTGGGAGAGCCTGCTTAAAATCAGCGGATCTACGCTA
GAGGCGTGGCAAGGATACATAGCTATGGAAGTTGAGATGGGTAATATTAATGAAGCACGA
TCCCTCTTTAAGAGATGCTACAGTAAACGATTTCCTGGGACTGGCTCCGAGGACATATGC
AATTCATGGATTCGCTTCGAGAGAGAGTATGGTGCACTTGAAGACTTTGACCTTGCCGTT
AAAAAGGTCACTCCTCGCCTTGAAGAACTGCAGTTATTCAAGTTACAAGAAGCTAAGAAC
ATTGGTCTGCCAGCAGATGATAGAGACAATTCCTCGAGGAAAAATGTGCGTGAAAAGAGG
AAGCCAGTATCAAATTTAATTGAAGAACAATCTCCTGCTAAACGTCACAAAGATAAGGCT
AAGAATGTTAAGATCACTTACGAAGATGGTAAAGGCCAAGCTAAAGACTCAGTGAAGGTA
AATAATACAAATCCAGATGTGGATGCCAGCAAACCAGCGAGTGGAAGCAAAAAAGAAAAC
AAAGATGTTTCTTCCGGAAAACCAAAGCAGTATAATGACCAGTGTACTGCATTTGTATCT
AATCTTAACCTCAAGGCAACGTATGACGACCTACGCAGATTCTTCAGTGATGTCGGAGGA
GTGGTTGCTATACGAATATTAAATGACAAGTTCACTGGAAAGTCAAGGGGATTGGCTTAT
GTGGATTTCTCGGATGACAAACACCTGGCTGCAGCCGTGGCAAAAAACAAGCAGACCTTG
CTTGGGAAGAGATTGAGCATTGCTAAGTCAGATCCCAAAGGCAGAAAAAAAGGAAGCGAT
TCTCACAGTGTGTCTTCAAGACAAGGTGAAGGTGCTGAGCAAACTACTGAGAGTTCAAAA
TCAGGTGCCAAGGATTCTGCTGAAGGTTCTAAGGAGGGCAAGGGGCATCAGGGGCAACCT
TCCAGTCATCAGCGGGCATCTAATATCCAGCTCAAAGGTAAGAATACGTTCGCAGTGCCC
AGAACTGTCAGGCCCCTTGGTTGGGTTGACAAAGATAAACCCATATCAGAAGAAACTGAT
GCTGCGGAAGATGAAATTCCTAAATCCAATGATGAATTTCGGAAAATGTTCATCAAATCT
TGA

Peptide Sequence

PEP ID

XP_016450171.1

PEP Infomation

PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3-like isoform X5 [Nicotiana tabacum]

Sequence

MNTIFPLSSEMWQEWTKDETSLSSGPEALPAIEKLFEHGVSDYLSVALWCDYLSFVQEHD
QSVRTRSVGGISKARNLFERALVAAGLHVTEGSRIWELYREFEQDVFLTIDETDADLREK
QVQRIRNLFHRQLSVPLADLSSTLHTYKAWEAKQGADLDVDSSNLDGLSPHVASSYQKAL
DMMNARTHLENQISCKVAPESERLQNFMAYLKFEQSLGDPSRIQILYERAITEFPISSEL
WLDYTHYMDKTLKTSSLVRDIYKRATRNCPWVGDLWVRYLLSLERSRASEEELSAVFEKA
LQCTFSSFEEYLDVFLTRVDGLRRRLSSLESGPESSDLDYIIIRETFQRASDYLSPHLKN
TESLLRMYRYWTRLESTLGKDSAAARGVWESLLKISGSTLEAWQGYIAMEVEMGNINEAR
SLFKRCYSKRFPGTGSEDICNSWIRFEREYGALEDFDLAVKKVTPRLEELQLFKLQEAKN
IGLPADDRDNSSRKNVREKRKPVSNLIEEQSPAKRHKDKAKNVKITYEDGKGQAKDSVKV
NNTNPDVDASKPASGSKKENKDVSSGKPKQYNDQCTAFVSNLNLKATYDDLRRFFSDVGG
VVAIRILNDKFTGKSRGLAYVDFSDDKHLAAAVAKNKQTLLGKRLSIAKSDPKGRKKGSD
SHSVSSRQGEGAEQTTESSKSGAKDSAEGSKEGKGHQGQPSSHQRASNIQLKGKNTFAVP
RTVRPLGWVDKDKPISEETDAAEDEIPKSNDEFRKMFIKS

Transcript Sequence

Gene sequence data has not been registered.